Publications
Lee Y, Chen E, Chan D, Dinesh A, Afiuni-Zadeh S, Klamann C, Selega A, Mrkonjic M, Jackson H, Campbell K. "Segmentation error aware clustering for highly multiplexed imaging."
bioRxiv (2024). DOI
Fang C, Selega A*, Campbell K*. "Beyond benchmarking and towards predictive models of dataset-specific single-cell RNA-seq pipeline performance."
Genome Biology 25 (2024): 159. DOI *jointly supervised
Selega A and Campbell K. "Multi-objective Bayesian optimization with heuristic objectives for biomedical and molecular data analysis workflows."
Transactions on Machine Learning Research (2023): 2835-8856. URL
Harrigan C, Rubanova Y, Morris Q, Selega A. "TrackSigFreq: subclonal reconstructions based on mutation signatures and allele frequencies."
Pacific Symposium on Biocomputing 25 (2020): 238-249. DOI
Selega A, Sirocchi C, Iosub I, Granneman S, Sanguinetti G. "Robust statistical modeling improves sensitivity of high-throughput RNA structure probing experiments."
Nature Methods 14 (2017): 83-89. DOI
van Nues R, Schweikert G*, de Leau E*, Selega A*, Langford A, Franklin R, Iosub I, Wadsworth P, Sanguinetti G, Granneman S.
"Kinetic CRAC uncovers a role for Nab3 in determining gene expression profiles during stress." Nature Communications 8.12 (2017).
DOI *contributed equally
Selega A and Sanguinetti G. "Trends and challenges in Computational RNA biology."
Genome Biology 17 (2016): 253. DOI (Invited review)
Thesis
Selega A. "Computational methods for RNA integrative biology." University of Edinburgh (2018) URL
